LatticeStatsBase.h

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//# LatticeStatsBase.h: base class for LatticeStatistics class
//# Copyright (C) 1996,1999,2000,2001
//# Associated Universities, Inc. Washington DC, USA.
//#
//# This library is free software; you can redistribute it and/or modify it
//# under the terms of the GNU Library General Public License as published by
//# the Free Software Foundation; either version 2 of the License, or (at your
//# option) any later version.
//#
//# This library is distributed in the hope that it will be useful, but WITHOUT
//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
//# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Library General Public
//# License for more details.
//#
//# You should have received a copy of the GNU Library General Public License
//# along with this library; if not, write to the Free Software Foundation,
//# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
//#
//# Correspondence concerning AIPS++ should be addressed as follows:
//#        Internet email: aips2-request@nrao.edu.
//#        Postal address: AIPS++ Project Office
//#                        National Radio Astronomy Observatory
//#                        520 Edgemont Road
//#                        Charlottesville, VA 22903-2475 USA
//#
//# $Id$
 
#ifndef LATTICES_LATTICESTATSBASE_H
#define LATTICES_LATTICESTATSBASE_H
 
#include <casacore/casa/aips.h>
#include <casacore/casa/Arrays/Vector.h>
#include <casacore/casa/BasicSL/String.h>
 
#include <set>
 
namespace casacore { //# NAMESPACE CASACORE - BEGIN
 
class IPosition;
class Regex;
 
// <summary> Base class for LatticeStatistics class</summary>
// <use visibility=export>
// 
// <reviewed reviewer="" date="yyyy/mm/dd" tests="" demos="">
// </reviewed>
// 
// <prerequisite>
//   <li> Vector
//   <li> String
// </prerequisite>
//
// <etymology>
// A simple base class for the <linkto class="LatticeStatistics">LatticeStatistics</linkto> class
// </etymology>
//
// <synopsis>
// This base class provides an <src>enum</src> defining allowed statistics types 
// and a helper function to convert between a <src>String</src> and a
// <src>Vector<Int></src> describing the desired statistics to plot.  The reason for
// having it as a base class rather than just part of LatticeStatistics is that
// the latter is templated, and it doesn't make much sense to invoke the static function
// <src>setStatisticTypes</src> function with a templated type.
// </synopsis>
//
// <example>
// <srcblock>
//    Vector<Int> statsToPlot = LatticeStatsBase::toStatisticTypes("mean,rms,sigma");
// </srcblock>
// </example>
//
// <todo asof="yyyy/mm/dd">
// </todo>
 
 
class LatticeStatsBase
{
public:
 
// This <src>enum StatisticTypes</src> is provided for use with the
// <src>LatticeStatistics<T>\::setPlotting</src> function.  It gives the allowed 
// statistics types that you can ask for.
   
enum StatisticsTypes {
 
// The number of points
   NPTS,
 
// The sum
   SUM,
 
// The sum squared
   SUMSQ,
 
// The median - the robust stats does not fit well into storage lattice approach
   MEDIAN,
 
// median of absolute deviation from median
   MEDABSDEVMED,
 
// inter-quartile range
   QUARTILE, 
 
   // The first and third quartiles
   Q1,
   Q3,
 
// The minimum
   MIN,
 
// The maximum
   MAX,
 
// The mean
   MEAN,
 
// The variance about the mean
   VARIANCE,
 
// The standard deviation about the mean
   SIGMA,
 
// The rms
   RMS,
 
// The flux density (can't always compute this - needs the beam)
   FLUX,
 
// The total number of available statistics to plot
   NSTATS,
 
// The total number of accumulation image items (not for general use:
// note that the accumulation items MUST come first in this enum)
// dmehring changed from VARIANCE+1 to SIGMA+1 because the standard
// deviation should be stored rather than taking the square root of
// the same value multiple times. Not to mention the biweight
// algorithm does not compute the variance, so that the standard
// deviation must be explicitly stored for it.
   NACCUM = SIGMA + 1
};
 
// Helper function to convert a String containing a list of desired statistics to
// the correct Vector<Int> required for the LatticeStatistics<T>::setPlotting
// function.  This may be usful if your user interface involves strings rather than integers.
// A new value is added to the output vector (which is resized appropriately) if any of the
// substrings "npts", "min", "max", "sum", "sumsq", "mean", "sigma", "rms", 
// and "flux" is present.  An empty vector results if there are no matches
// <group>
   static Vector<Int> toStatisticTypes (const String& statistics, 
                                        const std::regex& delimiter);
   static Vector<Int> toStatisticTypes (const Vector<String>& statistics);
// </group>
 
// Convert type to string.
// <group>
   static String toStatisticName (StatisticsTypes type);
   static String toStatisticName (Int type);
// </group>
 
// Returns -1 if the statistic string is not valid
   static Int toStatisticType (const String& statistic);
 
// Check and fill in defaults for a <src>Vector<Int></src> containing the 
// number of subplots in x and y to be put on a plot.  The <src>Vector<Int></src> 
// is resized to 2 before assignment.  A return value of <src>False</src> indicates 
// invalid arguments.
   static Bool setNxy (Vector<Int>& nxy,
                       ostream& os);
 
// A storage image is used to accumulate information as a function of the display
// axes as an image is iterated through.  This function sets the storage image shape 
// to that appropriate to the shape of the display axes and the desired size of the first
// or last dimension.  
   static void setStorageImageShape (IPosition& storeImageShape,
                                     const Bool& last,
                                     const Int& axisSize,
                                     const Vector<Int>& displayAxes,
                                     const IPosition& shape);
 
// Stretch a range by 10%
   static void stretchMinMax (Float& min, Float& max);
 
   static std::set<Double> quartileFracs();
};
 
 
} //# NAMESPACE CASACORE - END
 
#endif