MultiFileBase.h

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//# MultiFileBase.h: Abstract base class to combine multiple files in a single one
//# Copyright (C) 2014
//# Associated Universities, Inc. Washington DC, USA.
//#
//# This library is free software; you can redistribute it and/or modify it
//# under the terms of the GNU Library General Public License as published by
//# the Free Software Foundation; either version 2 of the License, or (at your
//# option) any later version.
//#
//# This library is distributed in the hope that it will be useful, but WITHOUT
//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
//# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Library General Public
//# License for more details.
//#
//# You should have received a copy of the GNU Library General Public License
//# along with this library; if not, write to the Free Software Foundation,
//# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
//#
//# Correspondence concerning AIPS++ should be addressed as follows:
//#        Internet email: aips2-request@nrao.edu.
//#        Postal address: AIPS++ Project Office
//#                        National Radio Astronomy Observatory
//#                        520 Edgemont Road
//#                        Charlottesville, VA 22903-2475 USA
//#
//# $Id: RegularFileIO.h 20551 2009-03-25 00:11:33Z Malte.Marquarding $
 
#ifndef CASA_MULTIFILEBASE_H
#define CASA_MULTIFILEBASE_H
 
//# Includes
#include <casacore/casa/aips.h>
#include <casacore/casa/IO/ByteIO.h>
#include <casacore/casa/BasicSL/String.h>
#include <casacore/casa/Utilities/CountedPtr.h>
#include <casacore/casa/vector.h>
#include <casacore/casa/ostream.h>
 
 
namespace casacore { //# NAMESPACE CASACORE - BEGIN
 
  //# Forward declaration.
  class AipsIO;
  class HDF5Group;
  class HDF5DataSet;
 
 
  // <summary>
  // Helper class for MultiFileInfo holding a data buffer
  // </summary>
  // <synopsis>
  // The buffer can be allocated with posix_memalign (for O_DIRECT support).
  // Hence the memory must be freed using free, which makes it impossible
  // to use a shared_ptr to that memory. Hence it is encapsulated in this class.
  // </synopsis>
  struct MultiFileBuffer {
    MultiFileBuffer (size_t bufSize, Bool useODirect);
    ~MultiFileBuffer()
      { if (data) free (data); }
    // Data member
    char* data;
  private:
    MultiFileBuffer (const MultiFileBuffer&);
    MultiFileBuffer& operator= (const MultiFileBuffer&);
  };
 
  // <summary>
  // Helper class for MultiFileBase containing info per internal file.
  // </summary>
  // <synopsis>
  // This struct defines the various fields describing a logical file in a
  // class derived from MultiFileBase (such as MultiFile or MultiHDF5).
  // </synopsis>
  // <use visibility=local>
  struct MultiFileInfo {
    // Initialize the object and create the buffer with the proper size.
    // If align>1 (for use of O_DIRECT), the buffer is properly aligned and it
    // is ensured that its size is a multiple of the alignment.
    explicit MultiFileInfo (Int64 bufSize=0, Bool useODirect=False);
    // Allocate the buffer.
    void allocBuffer (Int64 bufSize, Bool useODirect=False)
      { buffer = std::shared_ptr<MultiFileBuffer> (new MultiFileBuffer(bufSize, useODirect)); }
    //# Data members.
    vector<Int64> blockNrs;     // physical blocknrs for this logical file
    Int64         curBlock;     // the data block held in buffer (<0 is none)
    Int64         fsize;        // file size (in bytes)
    String        name;         // the virtual file name
    Bool          dirty;        // has data in buffer been changed?
    std::shared_ptr<MultiFileBuffer> buffer;       // buffer holding a data block
    CountedPtr<HDF5Group> group;
    CountedPtr<HDF5DataSet> dataSet;
  };
  void operator<< (ostream&, const MultiFileInfo&);
  void operator<< (AipsIO&, const MultiFileInfo&);
  void operator>> (AipsIO&, MultiFileInfo&);
 
 
  // <summary> 
  // Abstract base class to combine multiple files in a single one.
  // </summary>
 
  // <use visibility=export>
 
  // <reviewed reviewer="" date="" tests="tMultiFile" demos="">
  // </reviewed>
 
  // <synopsis> 
  // This class is a container file holding multiple virtual files. It is
  // primarily meant as a container file for the storage manager files of a
  // table to reduce the number of files used (especially for Lustre) and to
  // reduce the number of open files (especially when concatenating tables).
  // <br>A secondary goal is offering the ability to use an IO buffer size
  // that matches the file system well (large buffer size for e.g. ZFS).
  //
  // The SetupNewTable constructor has a StorageOption argument to define
  // if a MultiFile has to be used and if so, the buffer size to use.
  // It is also possible to specify that through aipsrc variables.
  //
  // A virtual file is spread over multiple (fixed size) data blocks in the
  // MultiFile. A data block is never shared by multiple files.
  // For each virtual file MultiFile keeps a MultiFileInfo object telling
  // the file size and the blocks numbers used for the file. When flushing
  // the MultiFile, this meta info is written into a header block and,
  // if needed, continuation blocks. On open and resync, it is read back.
  // <br>
  //
  // A virtual file is represented by an MFFileIO object, which is derived
  // from ByteIO and as such part of the casacore IO framework. It makes it
  // possible for applications to access a virtual file in the same way as
  // a regular file.
  //
  // It is possible to delete a virtual file. Its blocks will be added to
  // the free block list (which is also stored in the meta info).
  // </synopsis>
 
  // <example>
  // In principle it is possible to use the MultiFile functions directly.
  // However, in general it is much easier to use an MFFileIO object
  // per virtual file as shown below.
  // <srcblock>
  //    // Create a new MultiFile using a block size of 1 MB.
  //    MultiFile mfile("file.mf', ByteIO::New, 1048576);
  //    // Create a virtual file in it.
  //    MFFileIO mf1(mfile, "mf1", ByteIO::New);
  //    // Use it (for example) as the sink of AipsIO.
  //    AipsIO stream (&mf1);
  //    // Write values.
  //    stream << (Int)10;
  //    stream << True;
  //    // Seek to beginning of file and read data in.
  //    stream.setpos (0);
  //    Int vali;
  //    Bool valb;
  //    stream >> vali >> valb;
  // </srcblock>
  // </example>
 
  // <todo>
  //  <li> write headers at alternating file positions (for robustness)
  //  <li> possibly write headers entirely at the end if larger than blocksize
  // </todo>
 
 
  class MultiFileBase
  {
  public:
    // Open or create a MultiFileBase with the given name.
    // Upon creation the block size can be given. If 0, it uses the block size
    // of the file system the file is on.
    // If useODIrect=True, it means that O_DIRECT is used. If the OS does not
    // support it, the flag will always be False. If True, the data buffers will
    // have a proper alignment and size (as needed by O_DIRECT).
    MultiFileBase (const String& name, Int blockSize, Bool useODirect);
 
    // The destructor flushes and closes the file.
    virtual ~MultiFileBase();
 
    // Return the file id of a file in the MultiFileBase object.
    // If the name is unknown, an exception is thrown if throwExcp is set.
    // Otherwise it returns -1.
    Int fileId (const String& name, Bool throwExcp=True) const;
 
    // Add a file to the MultiFileBase object. It returns the file id.
    // Only the base name of the given file name is used. In this way the
    // MultiFileBase container file can be moved.
    Int addFile (const String& name);
 
    // Delete a file. It adds its blocks to the free block list.
    void deleteFile (Int fileId);
 
    // Read a block at the given offset. It returns the actual size read.
    Int64 read (Int fileId, void* buffer, Int64 size, Int64 offset);
 
    // Write a block at the given offset. It returns the actual size written.
    Int64 write (Int fileId, const void* buffer, Int64 size, Int64 offset);
 
    // Flush the file by writing all dirty data and all header info.
    void flush();
 
    // Resync with another process by clearing the buffers and rereading
    // the header. The header is only read if its counter has changed.
    void resync();
 
    // Reopen the underlying file for read/write access.
    // Nothing will be done if the file is writable already.
    // Otherwise it will be reopened and an exception will be thrown
    // if it is not possible to reopen it for read/write access.
    virtual void reopenRW() = 0;
 
    // Fsync the file (i.e., force the data to be physically written).
    virtual void fsync() = 0;
 
    // Get the file name of the MultiFileBase.
    String fileName() const
      { return itsName; }
 
    // Is the file writable?
    Bool isWritable() const
      { return itsWritable; }
 
    // Will O_DIRECT be used?
    Bool useODirect() const
      { return itsUseODirect; }
    
    // Get the block size used.
    Int64 blockSize() const
      { return itsBlockSize; }
 
    // Get the nr of virtual files.
    uInt nfile() const;
 
    // Get the total nr of data blocks used.
    Int64 size() const
      { return itsNrBlock; }
 
    // Get the info object (for test purposes mainly).
    const vector<MultiFileInfo>& info() const
      { return itsInfo; }
 
    // Get the free blocks (for test purposes mainly).
    const vector<Int64>& freeBlocks() const
      { return itsFreeBlocks; }
 
  private:
    void writeDirty (MultiFileInfo& info)
    {
      writeBlock (info, info.curBlock, info.buffer->data);
      info.dirty = False;
    }
 
    // Do the class-specific actions on adding a file.
    virtual void doAddFile (MultiFileInfo&) = 0;
    // Do the class-specific actions on deleting a file.
    virtual void doDeleteFile (MultiFileInfo&) = 0;
    // Flush the file itself.
    virtual void flushFile() = 0;
    // Flush and close the file.
    virtual void close() = 0;
    // Write the header info.
    virtual void writeHeader() = 0;
    // Read the header info. If always==False, the info is only read if the
    // header counter has changed.
    virtual void readHeader (Bool always=True) = 0;
    // Extend the virtual file to fit lastblk.
    virtual void extend (MultiFileInfo& info, Int64 lastblk) = 0;
    // Write a data block.
    virtual void writeBlock (MultiFileInfo& info, Int64 blknr,
                             const void* buffer) = 0;
    // Read a data block.
    virtual void readBlock (MultiFileInfo& info, Int64 blknr,
                            void* buffer) = 0;
 
  protected:
    // Set the flags and blockSize for a new MultiFile/HDF5.
    void setNewFile();
 
    //# Data members
    String itsName;
    Int64  itsBlockSize;  // The blocksize used
    Int64  itsNrBlock;    // The total nr of blocks actually used
    Int64  itsHdrCounter; // Counter of header changes
    vector<MultiFileInfo> itsInfo;
    std::shared_ptr<MultiFileBuffer> itsBuffer;  
    Bool                  itsUseODirect; // use O_DIRECT?
    Bool                  itsWritable;   // Is the file writable?
    Bool                  itsChanged;    // Has header info changed since last flush?
    vector<Int64>         itsFreeBlocks;
  };
 
 
} //# NAMESPACE CASACORE - END
 
#endif