AlignerHelper.Anchor

java.lang.Object

org.biojava.nbio.alignment.routines.AlignerHelper.Anchor

Enclosing class:: AlignerHelper

public static class AlignerHelper.Anchor extends Object

Compounds in query and target sequences that must align

Author:: Daniel Cameron

Nested Class Summary

Nested Classes

Modifier and Type

Class

Description

static class

AlignerHelper.Anchor.QueryIndexComparator
Constructor Summary

Constructors

Constructor

Description

Anchor(int queryIndex, int targetIndex)
Method Summary

Modifier and Type

Method

Description

int

getQueryIndex()

int

getTargetIndex()

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- Anchor
  
  public Anchor(int queryIndex, int targetIndex)
Method Details
- getQueryIndex
  
  public int getQueryIndex()
- getTargetIndex
  
  public int getTargetIndex()