Package org.biojava.nbio.alignment.template

Class CallableProfileProfileAligner<S extends Sequence<C>,C extends Compound>

java.lang.Object
org.biojava.nbio.alignment.template.CallableProfileProfileAligner<S,C>
Type Parameters:
S - each Sequence of the Profile pair is of type S
C - each element of an AlignedSequence is a Compound of type C
All Implemented Interfaces:
Callable<ProfilePair<S,C>>
public class CallableProfileProfileAligner<S extends Sequence<C>,C extends Compound> extends Object implements Callable<ProfilePair<S,C>>
Implements a concurrency wrapper for a ProfileProfileAligner.
Author:
Mark Chapman

  • Constructor Details

    • CallableProfileProfileAligner

      public CallableProfileProfileAligner(ProfileProfileAligner<S,C> ppa)
      Creates a profile-profile alignment task for simplified parallel execution.
      Parameters:
      ppa - already initialized profile-profile aligner

  • Method Details