Class Hierarchy
- java.lang.Object
- org.biojava.nbio.core.alignment.matrices.AAindexFactory
- org.biojava.nbio.core.alignment.matrices.AAIndexFileParser
- org.biojava.nbio.core.alignment.matrices.DefaultAAIndexProvider (implements org.biojava.nbio.core.alignment.matrices.AAIndexProvider)
- org.biojava.nbio.core.alignment.matrices.ScaledSubstitutionMatrix (implements org.biojava.nbio.core.alignment.template.SubstitutionMatrix<C>)
- org.biojava.nbio.core.alignment.matrices.SimpleSubstitutionMatrix<C> (implements java.io.Serializable, org.biojava.nbio.core.alignment.template.SubstitutionMatrix<C>)
- org.biojava.nbio.core.alignment.matrices.SubstitutionMatrixHelper (implements java.io.Serializable)
Interface Hierarchy
- org.biojava.nbio.core.alignment.matrices.AAIndexProvider