GOParser

java.lang.Object

org.biojava.nbio.ontology.io.GOParser

public class GOParser extends Object

Simple parser for the Gene Ontology (GO) flatfile format.

Since:: 1.4
Author:: Thomas Down

Constructor Summary

Constructors

Constructor

Description

GOParser()
Method Summary

Modifier and Type

Method

Description

Ontology

parseGO(BufferedReader goFile, String ontoName, String ontoDescription, OntologyFactory factory)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- GOParser
  
  public GOParser()
Method Details
- parseGO
  
  public Ontology parseGO(BufferedReader goFile, String ontoName, String ontoDescription, OntologyFactory factory) throws ParseException, IOException
  
  Throws:
  
  ParseException
  
  IOException