Class OboParser

Example

 OboParser parser = new OboParser();
                InputStream inStream = this.getClass().getResourceAsStream("/files/ontology/biosapiens.obo");

                BufferedReader oboFile = new BufferedReader ( new InputStreamReader ( inStream ) );
                try {
                        Ontology ontology = parser.parseOBO(oboFile, "BioSapiens", "the BioSapiens ontology");

                        Set keys = ontology.getTerms();
                        Iterator iter = keys.iterator();
                        while (iter.hasNext()){
                                System.out.println(iter.next());
                        }

                } catch (Exception e){
                        e.printStackTrace();
                }