Class Refine
java.lang.Object
org.biojava.nbio.structure.io.mmcif.model.Refine
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Constructor Summary
Constructors - 
Method Summary
Modifier and TypeMethodDescriptionvoidsetAniso_B11(String aniso_B11) voidsetAniso_B12(String aniso_B12) voidsetAniso_B13(String aniso_B13) voidsetAniso_B22(String aniso_B22) voidsetAniso_B23(String aniso_B23) voidsetAniso_B33(String aniso_B33) voidsetB_iso_max(String b_iso_max) voidsetB_iso_mean(String b_iso_mean) voidsetB_iso_min(String b_iso_min) voidsetCorrelation_coeff_Fo_to_Fc(String correlation_coeff_Fo_to_Fc) voidsetCorrelation_coeff_Fo_to_Fc_free(String correlation_coeff_Fo_to_Fc_free) voidsetDetails(String details) voidsetEntry_id(String entry_id) voidsetLs_d_res_high(String ls_d_res_high) voidsetLs_d_res_low(String ls_d_res_low) voidsetLs_matrix_type(String ls_matrix_type) voidsetLs_number_parameters(String ls_number_parameters) voidsetLs_number_reflns_all(String ls_number_reflns_all) voidsetLs_number_reflns_obs(String ls_number_reflns_obs) voidsetLs_number_reflns_R_free(String ls_number_reflns_R_free) voidsetLs_number_reflns_R_work(String ls_number_reflns_R_work) voidsetLs_number_restraints(String ls_number_restraints) voidsetLs_percent_reflns_obs(String ls_percent_reflns_obs) voidsetLs_percent_reflns_R_free(String ls_percent_reflns_R_free) voidsetLs_R_factor_all(String ls_R_factor_all) voidsetLs_R_factor_obs(String ls_R_factor_obs) voidsetLs_R_factor_R_free(String ls_R_factor_R_free) voidsetLs_R_factor_R_free_error(String ls_R_factor_R_free_error) voidsetLs_R_factor_R_free_error_details(String ls_R_factor_R_free_error_details) voidsetLs_R_factor_R_work(String ls_R_factor_R_work) voidsetLs_redundancy_reflns_obs(String ls_redundancy_reflns_obs) voidsetLs_wR_factor_R_free(String ls_wR_factor_R_free) voidsetLs_wR_factor_R_work(String ls_wR_factor_R_work) voidsetOccupancy_max(String occupancy_max) voidsetOccupancy_min(String occupancy_min) voidsetOverall_FOM_free_R_set(String overall_FOM_free_R_set) voidsetOverall_FOM_work_R_set(String overall_FOM_work_R_set) voidsetOverall_SU_B(String overall_SU_B) voidsetOverall_SU_ML(String overall_SU_ML) voidsetOverall_SU_R_Cruickshank_DPI(String overall_SU_R_Cruickshank_DPI) voidsetOverall_SU_R_free(String overall_SU_R_free) voidsetPdbx_data_cutoff_high_absF(String pdbx_data_cutoff_high_absF) voidsetPdbx_data_cutoff_high_rms_absF(String pdbx_data_cutoff_high_rms_absF) voidsetPdbx_data_cutoff_low_absF(String pdbx_data_cutoff_low_absF) voidsetPdbx_diffrn_id(String pdbx_diffrn_id) voidsetPdbx_isotropic_thermal_model(String pdbx_isotropic_thermal_model) voidsetPdbx_ls_cross_valid_method(String pdbx_ls_cross_valid_method) voidsetPdbx_ls_sigma_F(String pdbx_ls_sigma_F) voidsetPdbx_ls_sigma_I(String pdbx_ls_sigma_I) voidsetPdbx_method_to_determine_struct(String pdbx_method_to_determine_struct) voidsetPdbx_overall_ESU_R(String pdbx_overall_ESU_R) voidsetPdbx_overall_ESU_R_Free(String pdbx_overall_ESU_R_Free) voidsetPdbx_overall_phase_error(String pdbx_overall_phase_error) voidsetPdbx_overall_SU_R_Blow_DPI(String pdbx_overall_SU_R_Blow_DPI) voidsetPdbx_overall_SU_R_free_Blow_DPI(String pdbx_overall_SU_R_free_Blow_DPI) voidsetPdbx_overall_SU_R_free_Cruickshank_DPI(String pdbx_overall_SU_R_free_Cruickshank_DPI) voidsetPdbx_R_Free_selection_details(String pdbx_R_Free_selection_details) voidsetPdbx_refine_id(String pdbx_refine_id) voidsetPdbx_solvent_ion_probe_radii(String pdbx_solvent_ion_probe_radii) voidsetPdbx_solvent_shrinkage_radii(String pdbx_solvent_shrinkage_radii) voidsetPdbx_solvent_vdw_probe_radii(String pdbx_solvent_vdw_probe_radii) voidsetPdbx_starting_model(String pdbx_starting_model) voidsetPdbx_stereochem_target_val_spec_case(String pdbx_stereochem_target_val_spec_case) voidsetPdbx_stereochemistry_target_values(String pdbx_stereochemistry_target_values) voidsetPdbx_TLS_residual_ADP_flag(String pdbx_TLS_residual_ADP_flag) voidsetSolvent_model_details(String solvent_model_details) voidsetSolvent_model_param_bsol(String solvent_model_param_bsol) voidsetSolvent_model_param_ksol(String solvent_model_param_ksol)  
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Constructor Details
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Refine
public Refine() 
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Method Details
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getEntry_id
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setEntry_id
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getLs_number_reflns_obs
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setLs_number_reflns_obs
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getLs_number_reflns_all
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setLs_number_reflns_all
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getPdbx_ls_sigma_I
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setPdbx_ls_sigma_I
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getPdbx_ls_sigma_F
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setPdbx_ls_sigma_F
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getPdbx_data_cutoff_high_absF
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setPdbx_data_cutoff_high_absF
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getPdbx_data_cutoff_low_absF
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setPdbx_data_cutoff_low_absF
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getPdbx_data_cutoff_high_rms_absF
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setPdbx_data_cutoff_high_rms_absF
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getLs_d_res_low
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setLs_d_res_low
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getLs_d_res_high
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setLs_d_res_high
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getLs_percent_reflns_obs
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setLs_percent_reflns_obs
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getLs_R_factor_obs
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setLs_R_factor_obs
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getLs_R_factor_all
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setLs_R_factor_all
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getLs_R_factor_R_work
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setLs_R_factor_R_work
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getLs_R_factor_R_free
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setLs_R_factor_R_free
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getLs_R_factor_R_free_error
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setLs_R_factor_R_free_error
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getLs_R_factor_R_free_error_details
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setLs_R_factor_R_free_error_details
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getLs_percent_reflns_R_free
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setLs_percent_reflns_R_free
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getLs_number_reflns_R_free
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setLs_number_reflns_R_free
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getLs_number_parameters
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setLs_number_parameters
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getLs_number_restraints
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setLs_number_restraints
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getOccupancy_min
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setOccupancy_min
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getOccupancy_max
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setOccupancy_max
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getB_iso_mean
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setB_iso_mean
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getSolvent_model_details
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setSolvent_model_details
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getSolvent_model_param_ksol
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setSolvent_model_param_ksol
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getSolvent_model_param_bsol
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setSolvent_model_param_bsol
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getPdbx_ls_cross_valid_method
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setPdbx_ls_cross_valid_method
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getDetails
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setDetails
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getPdbx_starting_model
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setPdbx_starting_model
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getPdbx_method_to_determine_struct
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setPdbx_method_to_determine_struct
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getPdbx_isotropic_thermal_model
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setPdbx_isotropic_thermal_model
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getPdbx_stereochemistry_target_values
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setPdbx_stereochemistry_target_values
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getPdbx_stereochem_target_val_spec_case
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setPdbx_stereochem_target_val_spec_case
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getPdbx_R_Free_selection_details
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setPdbx_R_Free_selection_details
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getPdbx_overall_ESU_R
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setPdbx_overall_ESU_R
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getPdbx_overall_ESU_R_Free
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setPdbx_overall_ESU_R_Free
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getOverall_SU_ML
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setOverall_SU_ML
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getOverall_SU_B
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setOverall_SU_B
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getPdbx_refine_id
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setPdbx_refine_id
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getLs_redundancy_reflns_obs
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setLs_redundancy_reflns_obs
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getPdbx_overall_phase_error
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setPdbx_overall_phase_error
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getB_iso_min
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setB_iso_min
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getB_iso_max
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setB_iso_max
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getCorrelation_coeff_Fo_to_Fc
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setCorrelation_coeff_Fo_to_Fc
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getCorrelation_coeff_Fo_to_Fc_free
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setCorrelation_coeff_Fo_to_Fc_free
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getPdbx_solvent_vdw_probe_radii
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setPdbx_solvent_vdw_probe_radii
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getPdbx_solvent_ion_probe_radii
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setPdbx_solvent_ion_probe_radii
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getPdbx_solvent_shrinkage_radii
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setPdbx_solvent_shrinkage_radii
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getOverall_SU_R_Cruickshank_DPI
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setOverall_SU_R_Cruickshank_DPI
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getOverall_SU_R_free
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setOverall_SU_R_free
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getLs_wR_factor_R_free
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setLs_wR_factor_R_free
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getLs_wR_factor_R_work
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setLs_wR_factor_R_work
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getOverall_FOM_free_R_set
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setOverall_FOM_free_R_set
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getOverall_FOM_work_R_set
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setOverall_FOM_work_R_set
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getPdbx_diffrn_id
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setPdbx_diffrn_id
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getPdbx_TLS_residual_ADP_flag
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setPdbx_TLS_residual_ADP_flag
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getPdbx_overall_SU_R_free_Cruickshank_DPI
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setPdbx_overall_SU_R_free_Cruickshank_DPI
public void setPdbx_overall_SU_R_free_Cruickshank_DPI(String pdbx_overall_SU_R_free_Cruickshank_DPI)  - 
getPdbx_overall_SU_R_Blow_DPI
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setPdbx_overall_SU_R_Blow_DPI
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getPdbx_overall_SU_R_free_Blow_DPI
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setPdbx_overall_SU_R_free_Blow_DPI
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getLs_matrix_type
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setLs_matrix_type
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getLs_number_reflns_R_work
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setLs_number_reflns_R_work
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getAniso_B11
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setAniso_B11
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getAniso_B22
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setAniso_B22
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getAniso_B33
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setAniso_B33
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getAniso_B12
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setAniso_B12
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getAniso_B13
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setAniso_B13
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getAniso_B23
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setAniso_B23
 
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