java.lang.Object

org.biojava.nbio.structure.symmetry.gui.SymmetryCalc

All Implemented Interfaces:: Runnable, AlignmentCalculationRunnable

public class SymmetryCalc extends Object implements AlignmentCalculationRunnable

Calculates a symmetry analysis and displays the results. Linked to the SymmetryGUI. Does not generalize, uses CeSymm class directly to allow for the symmetry axis recovery.

Since:: 4.2.0
Author:: Aleix Lafita

Constructor Summary

Constructors

Constructor

Description

SymmetryCalc(SymmetryGui p, Structure s)

Requests for a structure to analyze.
Method Summary

Modifier and Type

Method

Description

void

cleanup()

void

interrupt()

void

run()

void

setNrCPUs(int useNrCPUs)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- SymmetryCalc
  
  public SymmetryCalc(SymmetryGui p, Structure s)
  
  Requests for a structure to analyze.
Method Details
- run
  
  public void run()
  
  Specified by:
  
  run in interface Runnable
- interrupt
  
  public void interrupt()
  
  Specified by:
  
  interrupt in interface AlignmentCalculationRunnable
- cleanup
  
  public void cleanup()
  
  Specified by:
  
  cleanup in interface AlignmentCalculationRunnable
- setNrCPUs
  
  public void setNrCPUs(int useNrCPUs)
  
  Specified by:
  
  setNrCPUs in interface AlignmentCalculationRunnable

Class SymmetryCalc

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Details

SymmetryCalc

Method Details

run

interrupt

cleanup

setNrCPUs