Class JmolSymmetryScriptGeneratorDn
java.lang.Object
org.biojava.nbio.structure.symmetry.jmolScript.JmolSymmetryScriptGenerator
org.biojava.nbio.structure.symmetry.jmolScript.JmolSymmetryScriptGeneratorPointGroup
org.biojava.nbio.structure.symmetry.jmolScript.JmolSymmetryScriptGeneratorDn
- Author:
 - Peter
 
- 
Constructor Summary
ConstructorsConstructorDescriptionJmolSymmetryScriptGeneratorDn(RotationAxisAligner axisTransformation, String name)  - 
Method Summary
Modifier and TypeMethodDescriptionintReturns the number of orientations available for this structuregetOrientationName(int index) Returns the name of a specific orientationintgetZoom()Returns the Jmol zoom to fit polyhedron and symmetry axes.Methods inherited from class org.biojava.nbio.structure.symmetry.jmolScript.JmolSymmetryScriptGeneratorPointGroup
colorBySequenceCluster, colorBySubunit, colorBySymmetry, drawAxes, drawPolyhedron, getAxisTransformation, getDefaultOrientation, getMaxExtension, getMeanExtension, getOrientation, getOrientationWithZoom, getPolyhedron, getRotationGroup, getTransformation, hideAxes, hidePolyhedron, playOrientations, setAxisTransformation, setDefaultColoring, setOnTheFly, setPolyhedron, setRotationGroup, showAxes, showPolyhedronMethods inherited from class org.biojava.nbio.structure.symmetry.jmolScript.JmolSymmetryScriptGenerator
f1Dot2, fDot2, getInstance, getInstantaneousOrientation, getJmolColor, getJmolColorScript, getJmolLigandScript, getJmolPoint, jMolFloat 
- 
Constructor Details
- 
JmolSymmetryScriptGeneratorDn
 
 - 
 - 
Method Details
- 
getZoom
public int getZoom()Description copied from class:JmolSymmetryScriptGeneratorReturns the Jmol zoom to fit polyhedron and symmetry axes. This zoom level should be used so that the polyhedron and symmetry axes are not cutoff.- Specified by:
 getZoomin classJmolSymmetryScriptGeneratorPointGroup- Returns:
 
 - 
getOrientationCount
public int getOrientationCount()Description copied from class:JmolSymmetryScriptGeneratorReturns the number of orientations available for this structure- Overrides:
 getOrientationCountin classJmolSymmetryScriptGeneratorPointGroup- Returns:
 - number of orientations
 
 - 
getOrientationName
Returns the name of a specific orientation- Overrides:
 getOrientationNamein classJmolSymmetryScriptGeneratorPointGroup- Parameters:
 index- orientation index- Returns:
 - name of orientation
 
 
 -