Class Hierarchy
- java.lang.Object
- org.forester.archaeopteryx.tools.Blast
 - java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
- java.awt.Container
- java.awt.Window (implements javax.accessibility.Accessible)
- java.awt.Dialog
- javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
- org.forester.archaeopteryx.tools.PhyloInferenceDialog (implements java.awt.event.ActionListener)
 
 
 - javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
 
 - java.awt.Dialog
 
 - java.awt.Window (implements javax.accessibility.Accessible)
 
 - java.awt.Container
 - org.forester.archaeopteryx.tools.ImageLoader (implements java.lang.Runnable)
 - org.forester.archaeopteryx.tools.InferenceManager
 - org.forester.archaeopteryx.tools.PhylogeneticInferenceOptions
 - org.forester.archaeopteryx.tools.ProcessPool
 - org.forester.archaeopteryx.tools.ProcessRunning
 - org.forester.archaeopteryx.tools.RunnableProcess (implements java.lang.Runnable)
- org.forester.archaeopteryx.tools.AncestralTaxonomyInferrer
 - org.forester.archaeopteryx.tools.PhylogeneticInferrer
 - org.forester.archaeopteryx.tools.SequenceDataRetriver
 
 
 
Enum Class Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
- org.forester.archaeopteryx.tools.PhylogeneticInferrer.MSA_PRG
 
 
 - java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)