GoTerm

All Superinterfaces:: Comparable<GoTerm>, PhylogenyData

All Known Implementing Classes:: BasicGoTerm

public interface GoTerm extends PhylogenyData, Comparable<GoTerm>

Method Summary

Modifier and Type

Method

Description

List<GoId>

getAltIds()

String

getComment()

String

getDefinition()

GoId

getGoId()

GoNameSpace

getGoNameSpace()

List<GoRelationship>

getGoRelationships()

List<GoSubset>

getGoSubsets()

List<GoXRef>

getGoXRefs()

String

getName()

List<GoId>

getSuperGoIds()

boolean

isObsolete()

Methods inherited from interface java.lang.Comparable
compareTo

Methods inherited from interface org.forester.phylogeny.data.PhylogenyData
asSimpleText, asText, copy, isEqual, toNHX, toPhyloXML

Method Details
- getAltIds
  
  List<GoId> getAltIds()
- getComment
  
  String getComment()
- getDefinition
  
  String getDefinition()
- getGoId
  
  GoId getGoId()
- getGoNameSpace
  
  GoNameSpace getGoNameSpace()
- getGoRelationships
  
  List<GoRelationship> getGoRelationships()
- getGoSubsets
  
  List<GoSubset> getGoSubsets()
- getGoXRefs
  
  List<GoXRef> getGoXRefs()
- getName
  
  String getName()
- getSuperGoIds
  
  List<GoId> getSuperGoIds()
- isObsolete
  
  boolean isObsolete()